Proteome Bioinformatics [Paperback]

This thorough book covers the most recent proteomics techniques, databases, bioinformatics tools, and computational approaches that are used for the identification and functional annotation of proteins and their structure. The most recent proteomic resources widely used in the biomedical scientific community for storage and dissemination of data are discussed. In addition, specific MS/MS spectrum similarity scoring functions and their application in the field of proteomics, statistical evaluation of labeled comparative proteomics using permutation testing, and methods of phylogenetic analysis using MS data are also described in detail. Written for the highly successful Methods in Molecular Biology series, chapters contain the kind of detail and key implementation advice to ensure successful results. 

1. An Introduction to Proteome Bioinformatics

            Shivakumar Keerthikumar

 

2. Proteomic Data Storage and Sharing

            Shivakumar Keerthikumar and Suresh Mathivanan

 

3. Choosing an Optimal Database for Protein Identification from Tandem Mass Spectrometry Data

            Dhirendra Kumar, Amit Kumar Yadav, and Debasis Dash

 

4. LlCn